MHTyper a microhaplotype allele-calling pipeline f

更新时间:2023-06-16 15:26:24 阅读: 评论:0

后退英文
MHTyper: a microhaplotype allele-calling pipeline for u with next generation quencing data 期刊名称: Australian Journal of Forensic Sciences
作者: Chi Zhang,Yan-Dong Cao,Jiao-Jiao Song,Min Rao,Le Wang
年份: 2019年
butcher什么意思关键词: Forensic genetics;microhaplotype;allele-calling;bioinformatics;next
生日歌英文
generation quencingeliminated
admiralty摘要:Microhaplotypes have been reported for applications in different aspects of human forensics. Next generation quencing (NGS) posss veral advantages in microhaplotype genotyping. Large amounts of NGS-bad microhaplotype data has been accumulated, and bioinformatic software designed for microhaplotype NGS data analysis is in urgent need. In this work, we introduced MHTyper, a Linux/Unix pipeline designed for efficient microhaplotype allele-calling and quencing depth statistics. We developed an NGS-bad 30-plex microhaplotype panel and ud MHTyper to ana
日程表英语
ly the data produced. The allele-calling accuracy of MHTyper was evaluated by manually comparing the MHTyper-reported genotypes with tho visualized, along with the well-accepted bioinformatic software Integrative Genomics Viewer. No discordance was obrved in all webui
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